Information for 22-GACAWATCTWTTTGAA (Motif 30)

A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
Reverse Opposite:
A C G T C G A T A G T C C G T A C G T A C G T A C G A T C G T A A C T G C G T A A C G T C G A T C G A T A C T G A C G T G T A C
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 24.4bp
Average Position of motif in Background27.4 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACAWATCTWTTTGAA-
AAAACATCGTTTTTAAG
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:9
Orientation:forward strand
Alignment:GACAWATCTWTTTGAA--
---------ATTTGAATT
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACAWATCTWTTTGAA
AAGATATCCTT-----
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GACAWATCTWTTTGAA
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.59
Offset:10
Orientation:reverse strand
Alignment:GACAWATCTWTTTGAA----
----------TTTGAAACCG
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GACAWATCTWTTTGAA
---TAATCAATTA---
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACAWATCTWTTTGAA
-HNRAATCAAT-----
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GACAWATCTWTTTGAA
--ANTATCGATTTTTN
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A
A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GACAWATCTWTTTGAA-----
----NNTTCCTTTGATCTNNA
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GACAWATCTWTTTGAA-----
----NNTTCCTTTGATCTANA
 A C T G C G T A T A G C C G T A C G A T C G T A A C G T A G T C G A C T C G A T A C G T A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A