Information for 14-GCCAKGCCTCTTGRCA (Motif 21)

A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
Reverse Opposite:
A C G T A C T G A G T C A G T C G T C A G C T A C T A G C G T A A T C G A C T G T G A C G T A C C G A T A C T G A C T G T G A C
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.738
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 35.1bp
Average Position of motif in Background29.7 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCAKGCCTCTTGRCA
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCAKGCCTCTTGRCA
TGCCAA-----------
 A C G T A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCCAKGCCTCTTGRCA--
--------NNTTGGCANN
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCAKGCCTCTTGRCA
-CNAGGCCT-------
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GCCAKGCCTCTTGRCA-
---------CTTGGCAA
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCCAKGCCTCTTGRCA
NNGGCCACGCCTTTN----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCAKGCCTCTTGRCA
GTGCCACGCGACTG----
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCCAKGCCTCTTGRCA---
----RGSMTBCTGGGAAAT
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GCCAKGCCTCTTGRCA--
----------TTGACAGG
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCAKGCCTCTTGRCA
GCTCGGSCTC------
 A C T G A G T C A G T C C G T A A C T G A C T G T A G C A T G C C G A T A G T C C G A T A C G T A C T G C T A G T G A C G T C A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T