Information for 12-AAGTACACAGTCTACA (Motif 18)

C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
Reverse Opposite:
C G A T T A C G C G A T T G C A A C T G G T C A T G A C C G A T A C T G C G A T A C T G C G A T C G T A G A T C A G C T A G C T
p-value:1e-12
log p-value:-2.829e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.9 +/- 10.5bp
Average Position of motif in Background45.0 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGTACACAGTCTACA
CANAGNNCAAAGTCCA--
 A C G T A C G T C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGTACACAGTCTACA
AGAGTCCAAAGTCCA--
 A C G T C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGTACACAGTCTACA
AAAGTAAACA-------
 A C G T C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGTACACAGTCTACA
AAGAACATWHTGTTC-
 C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGTACACAGTCTACA
AAAGTAAACA-------
 A C G T C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGTACACAGTCTACA-
GGGTACATAATGTTCCC
 C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGTACACAGTCTACA-
GGGAACACGGTGTACCC
 C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGTACACAGTCTACA-
GGGAACACAATGTTCCC
 C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AAGTACACAGTCTACA
NCTAAGTAAACA-------
 A C G T A C G T A C G T C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGTACACAGTCTACA
AAGTAAACAAA-----
 C T G A C T G A C T A G C G A T C G T A G T A C C G T A T G A C C G T A A C T G A C G T T G A C A C G T C G T A A T G C C G T A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T