Information for 10-GGTTTAYTTWGACCCA (Motif 11)

C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
Reverse Opposite:
C G A T A C T G A T C G A C T G A G C T A G T C G C A T G T C A C G T A C T A G A C G T C G T A C G T A C G T A A G T C A G T C
p-value:1e-12
log p-value:-2.989e+01
Information Content per bp:1.747
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 23.5bp
Average Position of motif in Background53.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTTTAYTTWGACCCA
TGTTTACTTT------
 C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTTTAYTTWGACCCA
TGTTTACTTT------
 C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTAYTTWGACCCA
NGGGATTA----------
 A C G T A C G T C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTTTAYTTWGACCCA
TGTTTACTTAGG----
 C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTTTAYTTWGACCCA
TGTTTATTT-------
 C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGTTTAYTTWGACCCA
TCCATGTTTACTTTG-----
 A C G T A C G T A C G T A C G T C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGTTTAYTTWGACCCA
AGAGGGGATTAATTTAT----
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTAYTTWGACCCA
NNNTTTTAATTAANNNN-
 A C G T A C G T C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C A C G T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTTTAYTTWGACCCA
-AATTAATTAGT----
 C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTTTAYTTWGACCCA
NNTGTTTATTTTGGCA--
 A C G T A C G T C T A G C T A G C G A T C G A T A C G T C G T A G A T C A C G T A C G T C G T A C T A G T C G A G T A C A T G C G T A C C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T