Information for 2-DAAGAACACDGTGTWC (Motif 2)

C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C
Reverse Opposite:
C A T G G C T A C G T A A G T C G C T A A T G C G C A T T C A G G C A T A C T G C G A T G C A T G A T C G A C T C G A T G C T A
p-value:1e-166
log p-value:-3.831e+02
Information Content per bp:1.545
Number of Target Sequences with motif210.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif953.0
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets50.6 +/- 20.5bp
Average Position of motif in Background50.5 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC
-AAGAACATWHTGTTC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC
-VAGRACAKWCTGTYC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:DAAGAACACDGTGTWC-
-NAGAACAGNCTGTNCT
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC-
-NAGNACANNNTGTNCT
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC
-VAGRACAKNCTGTBC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C
A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC--
-GGGTACATAATGTTCCC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:DAAGAACACDGTGTWC--
-GGGAACATTGTGTTCCC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T A C G T
A C G T C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:DAAGAACACDGTGTWC--
-NGGTACACNGTGTTCCC
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T A C G T
A C G T C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-DAAGAACACDGTGTWC
CCAGGAACAG-------
 A C G T C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:DAAGAACACDGTGTWC----
NGAGGTCANNGAGTTCANNN
 C G A T G C T A C T G A C T A G C G T A C G T A T A G C C G T A A G T C C G T A T A C G C G A T A C T G G C A T C G A T G A T C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G