Information for 1-YAAACAANAAAGAACA (Motif 1)

A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T G C A T A G T C G A C T G C A T C A G T C T A G G A C T C G A T C T A G A C G T A C G T A C G T C T A G
p-value:1e-308
log p-value:-7.111e+02
Information Content per bp:1.724
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif27.35%
Number of Background Sequences with motif156.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets53.8 +/- 20.0bp
Average Position of motif in Background53.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--YAAACAANAAAGAACA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-YAAACAANAAAGAACA
GTAAACA----------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---YAAACAANAAAGAACA
AAATAAACA----------
 A C G T A C G T A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YAAACAANAAAGAACA
GTAAACA----------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YAAACAANAAAGAACA
GTAAACA----------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YAAACAANAAAGAACA
GTAAACAWBN-------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YAAACAANAAAGAACA
GTAAACAA---------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YAAACAANAAAGAACA
GTAAACAA---------
 A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.61
Offset:7
Orientation:forward strand
Alignment:YAAACAANAAAGAACA-
-------CCAGGAACAG
 A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----YAAACAANAAAGAACA
WWATRTAAACAN---------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T C A C G T A A G T C C G T A C T G A G A T C G T C A C G T A C T G A A C T G C G T A C G T A A G T C C G T A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T