Information for 1-NWNTGTTTRCTTW (Motif 1)

G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
Reverse Opposite:
C G A T T C G A C G T A T C A G A G C T C G T A C G T A C G T A A G T C C G T A G C T A C G A T C G T A
p-value:1e-138
log p-value:-3.192e+02
Information Content per bp:1.636
Number of Target Sequences with motif360.0
Percentage of Target Sequences with motif49.18%
Number of Background Sequences with motif5121.0
Percentage of Background Sequences with motif11.54%
Average Position of motif in Targets52.7 +/- 23.8bp
Average Position of motif in Background50.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.95
Offset:3
Orientation:forward strand
Alignment:NWNTGTTTRCTTW
---TRTTTACTTW
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:NWNTGTTTRCTTW
---TGTTTACTTT
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:NWNTGTTTRCTTW
---TGTTTACTTT
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NWNTGTTTRCTTW
-TTTGTTTACTTA
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-NWNTGTTTRCTTW-
TCCATGTTTACTTTG
 A C G T G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.91
Offset:3
Orientation:forward strand
Alignment:NWNTGTTTRCTTW
---TGTTTATTT-
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.91
Offset:3
Orientation:forward strand
Alignment:NWNTGTTTRCTTW--
---TGTTTACTTAGG
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.90
Offset:3
Orientation:reverse strand
Alignment:NWNTGTTTRCTTW
---TGTTTAC---
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NWNTGTTTRCTTW
--ATATTTACATA
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NWNTGTTTRCTTW--
BSNTGTTTACWYWGN
 G C A T G C A T C G A T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T G C T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G