Information for 10-AAGAAAGCCA (Motif 28)

T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A
Reverse Opposite:
C A G T C T A G A T C G A G T C C G A T C G A T C A G T T A G C G C A T A C G T
p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.486
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.67%
Number of Background Sequences with motif959.2
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets41.7 +/- 24.8bp
Average Position of motif in Background51.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAGAAAGCCA-
-----TGCCAA
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAGAAAGCCA--
---CGTGCCAAG
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGAAAGCCA-
TGGCAGNCTGCCAG
 A C G T A C G T A C G T T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGAAAGCCA
----CAGCC-
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGAAAGCCA
VRRACAAWGG--
 A C G T A C G T T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGAAAGCCA---
----ATGCCAACC
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGAAAGCCA
-ACAAAG---
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAGAAAGCCA
AAAACAAAGG--
 A C G T A C G T T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAGCCA-
TGGCACCATGCCAA
 A C G T A C G T A C G T T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAGAAAGCCA----
----AAACCACANN
 T G C A C G T A A T C G G T C A G C T A G C T A T C A G T A G C G A T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A