Information for 17-RTACACACATGTT (Motif 25)

C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C G T A C T G C G A T A C T G G A C T C A T G A C G T C T G A A G C T
p-value:1e-8
log p-value:-2.013e+01
Information Content per bp:1.780
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.2 +/- 22.7bp
Average Position of motif in Background55.0 +/- 38.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RTACACACATGTT
---AACACGTGTT
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTACACACATGTT----
-CNGACACCTGTTCNNN
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RTACACACATGTT
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RTACACACATGTT
---AACAGCTGTT
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RTACACACATGTT----
--ANCCACCTGTTGCNC
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

ZBTB18/MA0698.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RTACACACATGTT-
-CATCCAGATGTTC
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T A C G T
A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RTACACACATGTT
---ACCATATGTT
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RTACACACATGTT-
--AAACATATGTTT
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:RTACACACATGTT
-----CACGTGNT
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RTACACACATGTT--
---AACAGATGGTCN
 C T G A A G C T C G T A G A T C C T G A A G T C C G T A G T A C T C G A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G