Information for 9-TGTHCTCCATTATKCA (Motif 17)

A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A
Reverse Opposite:
A G C T C T A G T G C A C G T A A G C T C G T A C T G A C A G T C T A G C T A G C G T A A C T G C A G T C G T A A G T C C G T A
p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.732
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.8 +/- 25.5bp
Average Position of motif in Background44.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTHCTCCATTATKCA--
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA-
-----TGAATTATGCAT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGTHCTCCATTATKCA
------TCATCAATCA
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA
------YCATTAMC--
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA-
-CTCATTAATTATGCAT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T
A C G T A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA-
---CATTAATTATTCAT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T
A C G T A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F2/MA0683.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA-
-CTCATTAATTATGCAT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T
A C G T A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA-
--TCATGAATWATTCAT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T
A C G T A C G T G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

PH0038.1_Hlx/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA
TGTAATTAATTATGG-
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGTHCTCCATTATKCA------
-----TNNATTATGCATANNTT
 A C G T A C T G C G A T G C T A T G A C C G A T G A T C A G T C G T C A A G C T A C G T C T G A C G A T A C G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T