Information for 6-AGCGCTCCCTGCT (Motif 6)

C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A C T G A C T G C T G A C T A G A G T C A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 25.6bp
Average Position of motif in Background48.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AGCGCTCCCTGCT---
----CCCCCTGCTGTG
 C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCGCTCCCTGCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCGCTCCCTGCT----
--GGCCYCCTGCTGDGH
 C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCTCCCTGCT-----
TAGCGCCCCCTGGTGGCCA
 A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCGCTCCCTGCT-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCTCCCTGCT
ANCGCGCGCCCTTNN
 A C G T A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCGCTCCCTGCT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCTCCCTGCT
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCGCTCCCTGCT
---GCTCCG----
 C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCGCTCCCTGCT------
----TCNCCTGCTGNGNNN
 C G T A A C T G A G T C T A C G A G T C A G C T A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G