Information for 3-GCGCCCBCTCCTGACC (Motif 2)

A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
Reverse Opposite:
A C T G C T A G G C A T A G T C G T C A A C T G A C T G C G T A C T A G T C A G A C T G A C T G A T C G G T A C T C A G A G T C
p-value:1e-35
log p-value:-8.073e+01
Information Content per bp:1.761
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.1 +/- 22.9bp
Average Position of motif in Background65.3 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCBCTCCTGACC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCBCTCCTGACC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCBCTCCTGACC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCGCCCBCTCCTGACC
---CCCCCCCC-----
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCGCCCBCTCCTGACC
---NNAYTTCCTGHN-
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCGCCCBCTCCTGACC
--NCCACTTCCGG---
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGCCCBCTCCTGACC
----CACTTCCTGT--
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCGCCCBCTCCTGACC
---CCACTTCCGGC--
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCCCBCTCCTGACC
-TTCCCCCTAC-----
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCGCCCBCTCCTGACC
--ACCACATCCTGT--
 A C T G A G T C A C T G A T G C A G T C G T A C A G T C A G T C A C G T G T A C A G T C C A G T A C T G C G T A G A T C T G A C
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T