Information for 10-CCAGAACAKRAGC (Motif 12)

A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G C T G T A C A C G T A C T G A C G T A C G T A G T C A C G T C T A G C T A G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.5 +/- 21.2bp
Average Position of motif in Background51.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCAGAACAKRAGC
CCAGGAACAG----
 A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGAACAKRAGC
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGAACAKRAGC
NNGATCTAGAACCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGAACAKRAGC----
-ATGTACAGTAGCAAAG
 A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAGAACAKRAGC
NGNTCTAGAACCNGV--
 A C G T A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAGAACAKRAGC----
-ATTTACAGTAGCAAAA
 A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAACAKRAGC
ATGCCAGACN------
 A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAGAACAKRAGC-
GCAAAACATTACTA
 A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCAGAACAKRAGC
ATATCAAAACAAAACA
 A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAGAACAKRAGC
CAAACAACAACACCT--
 A C G T A C G T A C G T A C G T A G T C G A T C C G T A A C T G G T C A C G T A A G T C C G T A A C T G C T G A C G T A A C T G A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T