Information for 7-TCSGAGAAAT (Motif 10)

C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
Reverse Opposite:
G T C A A G C T A C G T A G C T A G T C A C G T A T G C A T C G A C T G G T C A
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.722
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets43.5 +/- 22.0bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCSGAGAAAT--
GNNACCGAGAATNNN
 A C G T A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCSGAGAAAT
TTTCTNAGAAAN
 A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCSGAGAAAT--
TTTCCAGGAAATGG
 A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCSGAGAAAT--
TTGACCGAGAATTCC
 A C G T A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCSGAGAAAT
TTCTTGGAAAN
 A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCSGAGAAAT---
ATTTACGACAAATAGC
 A C G T A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCSGAGAAAT
NATTTCCNGGAAAT
 A C G T A C G T A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCSGAGAAAT-
-GGGAGGACNG
 C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCSGAGAAAT
--AGAGGAA-
 C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCSGAGAAAT
CTTCTGGGAAA-
 A C G T A C G T C A G T T G A C T A G C A T C G T G C A A C T G T C G A C G T A T C G A C A G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T