Information for 3-NHTGTTTATA (Motif 3)

A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
Reverse Opposite:
A G C T T G C A G C A T G C T A C G T A C G T A A G T C C G T A C A T G T A C G
p-value:1e-24
log p-value:-5.595e+01
Information Content per bp:1.655
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif24.32%
Number of Background Sequences with motif5554.2
Percentage of Background Sequences with motif11.56%
Average Position of motif in Targets49.4 +/- 25.2bp
Average Position of motif in Background50.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NHTGTTTATA---
-NTGTTTAYATWW
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A A C G T A C G T A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NHTGTTTATA
--TGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NHTGTTTATA--
CBTGTTTAYAWW
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A A C G T A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXD2/MA0847.1/Jaspar

Match Rank:4
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NHTGTTTATA
--TGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:NHTGTTTATA
-TTGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-NHTGTTTATA
NVWTGTTTAC-
 A C G T A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.91
Offset:2
Orientation:forward strand
Alignment:NHTGTTTATA-
--TGTTTATTT
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A A C G T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:NHTGTTTATA
-TTGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NHTGTTTATA
--TGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NHTGTTTATA
--TGTTTAC-
 A T G C G T A C C G A T C T A G C G A T A C G T C G A T C G T A A C G T T C G A
A C G T A C G T C G A T C T A G G A C T C A G T A C G T G C T A A G T C A C G T