Information for 13-TGGGTTAGTT (Motif 19)

A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
Reverse Opposite:
T C G A C G T A A G T C A C G T C G T A C G T A A G T C G T A C A G T C C G T A
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.944
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets76.1 +/- 15.4bp
Average Position of motif in Background44.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGGTTAGTT
-GGATTAGC-
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGGTTAGTT
GGGATTANN-
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGGTTAGTT
GGGATTAA--
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTTAGTT
NGGGATTA---
 A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTTAGTT
TTGCCCGGATTAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGTTAGTT
RGGATTAR--
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTTAGTT--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTTAGTT
NNGGATTAGN-
 A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTTAGTT
VRGGATTARN-
 A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTTAGTT--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G C T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A