Information for 6-GCATCTGGCATYGTGC (Motif 17)

A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A G T A C C T A G C G T A A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 26.4bp
Average Position of motif in Background44.0 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCATCTGGCATYGTGC
-GGTCTGGCAT-----
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCATCTGGCATYGTGC--
----TTGGCATGGTGCCA
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCATCTGGCATYGTGC---
---CTTGGCANNNTGCCAA
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCATCTGGCATYGTGC--
----CTGGCAGNCTGCCA
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCATCTGGCATYGTGC
AACATCTGGA-------
 A C G T A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCATCTGGCATYGTGC
CCNNACCATCTGGCCTN----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCATCTGGCATYGTGC--
-CAKCTGKYCYYTTYCCC
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C A C G T A C G T
A C G T T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTGGCATYGTGC
GCCAGCTGBTNB-----
 A C G T A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCATCTGGCATYGTGC
ACATATGG--------
 A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCATCTGGCATYGTGC
NVCAGCTGBBNN-----
 A C G T A C T G G T A C C G T A A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C G T A G C T A C T G A C G T A C T G G T A C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T