Information for 11-SRGGKCATGATGK (Motif 15)

A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C G T A G T C C G T A A C G T A T C G G T A C A G T C A G T C A G T C A T C G
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 27.3bp
Average Position of motif in Background40.4 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SRGGKCATGATGK
-AGGTCA------
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SRGGKCATGATGK---
-AGGTCACCCTGACCT
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SRGGKCATGATGK
AGRGGTCA------
 A C G T A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SRGGKCATGATGK--
NAGGTCACNNTGACC
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SRGGKCATGATGK
TRAGGTCA------
 A C G T A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:SRGGKCATGATGK---
---AAGATGATGTCAT
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

ZNF143/MA0088.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SRGGKCATGATGK---
CAATGCATTGTGGGTA
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----SRGGKCATGATGK
CGCGCCGGGTCACGTA--
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:SRGGKCATGATGK---
------ATGATGCAAT
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:SRGGKCATGATGK
---GTCATN----
 A T G C C T A G A C T G A C T G C A T G A T G C G T C A A C G T A C T G C G T A A C G T A C T G A C T G
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T