Information for 5-AMAGRAARYTCMYAAA (Motif 14)

C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T C T A G A C G T A T C G C G T A T C A G A G T C A C G T A C G T A G T C A G T C A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 19.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMAGRAARYTCMYAAA
AACAGGAAGT-------
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AMAGRAARYTCMYAAA
NACAGGAAAT-------
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AMAGRAARYTCMYAAA
ACAGGAAGTG------
 C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMAGRAARYTCMYAAA
NACAGGAAAT-------
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AMAGRAARYTCMYAAA
---GGAAATTCCC---
 C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AMAGRAARYTCMYAAA
---GGAAATTCCC---
 C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AMAGRAARYTCMYAAA----
----AAAGCTCGTAAAATTT
 C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AMAGRAARYTCMYAAA
ANCAGGAAGT-------
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AMAGRAARYTCMYAAA
NDCAGGAARTNN-----
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AMAGRAARYTCMYAAA
AACCGGAAGT-------
 A C G T C G T A G T A C C G T A A C T G C T A G C G T A C G T A C T A G A G T C C G A T A T G C G T C A A G T C C G T A G T C A C G T A
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T