Information for 7-GGCWGKTTGATTA (Motif 12)

A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A
Reverse Opposite:
A C G T G T C A G T C A C G A T A G T C C G T A G T C A G T C A A G T C C G T A A C T G A G T C G T A C
p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.790
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.7 +/- 20.8bp
Average Position of motif in Background50.7 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCWGKTTGATTA-----
-ACCGGTTGATCACCTGA
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGCWGKTTGATTA-
------TTGTTTAC
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCWGKTTGATTA----
-NNNNTTTGTTTACNNT
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCWGKTTGATTA
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGCWGKTTGATTA
---TGATTGATGA
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGCWGKTTGATTA-
------TTGTTTAC
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCWGKTTGATTA------
--NNNTTTGTTTACNTTNN
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCWGKTTGATTA------
--NNNTTTGTTTACNTTNN
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCWGKTTGATTA------
--NNNTTTGTTTACATTTN
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCWGKTTGATTA------
--NNNTTTGTTTACATTTN
 A C T G A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C T G C G T A A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T