Information for 9-AGGGAGGCAAGGA (Motif 23)

C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
Reverse Opposite:
A G C T A T G C T G A C G A C T A C G T A T C G T A G C G A T C C A G T G A T C G A T C G A T C G A C T
p-value:1e-6
log p-value:-1.494e+01
Information Content per bp:1.634
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 29.2bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGGGAGGCAAGGA-
---AAGGCAAGTGT
 C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AGGGAGGCAAGGA-----
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGGAGGCAAGGA
-GGGCGGGAAGG-
 C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGGAGGCAAGGA---
GGAAGGAAGGAAGGAAGG
 A C G T A C G T C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAGGCAAGGA
SCAGYCADGCATGAC
 A C G T A C G T C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGGGAGGCAAGGA
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGGAGGCAAGGA
-GGGAGGACNG--
 C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AGGGAGGCAAGGA----
-------CAAGGHCANV
 C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGGGAGGCAAGGA
-GGGCGGGAAGG-
 C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGAGGCAAGGA
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C T A G C T A G G T C A C T A G A T C G T A G C G T C A C T G A A C T G T A C G T C G A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T