Information for 11-GTWYKGTGKTRAGKAC (Motif 19)

A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
Reverse Opposite:
A C T G A C G T G T C A A G T C G A C T A G C T G T C A G T C A A G T C C G T A A G T C G T A C C T G A G C T A C G T A A G T C
p-value:1e-6
log p-value:-1.580e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 28.6bp
Average Position of motif in Background76.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC
---AGGTGTTAAT---
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC------
-----NATTTAAGTACTTANNA
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTWYKGTGKTRAGKAC
--AAGGTGTKAA----
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC
-NNHTGTGGTTWN---
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC-------
------TTCNAAGTACTTNNNNN
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTWYKGTGKTRAGKAC
--TAGGTGTGAAG---
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GTWYKGTGKTRAGKAC------
------CTTTAAGTACTTAATG
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC
---CTGTGGTTTN---
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTWYKGTGKTRAGKAC
--GCTGTGGTTT----
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:GTWYKGTGKTRAGKAC--
--------TTAAGTGCTT
 A C T G A C G T C G A T A G C T A C T G A C T G A C G T A C T G A C G T A C G T C T G A C G T A A C T G A C G T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T