Information for 14-TCYSTKTGCATGA (Motif 13)

A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A G T C G T C A T G A C C T G A A T C G C T G A A C T G G T C A
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.886
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.4 +/- 23.4bp
Average Position of motif in Background31.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCYSTKTGCATGA
---ATTTGCATAA
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCYSTKTGCATGA
TTCATTTGCATAT
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCYSTKTGCATGA-----
---ATTTGCATAACAAAG
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:TCYSTKTGCATGA-
--------CATGAC
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCYSTKTGCATGA--
-----TTGCGTGCVA
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCYSTKTGCATGA
BTVATTWGCATA-
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCYSTKTGCATGA
---ATTTGCATA-
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCYSTKTGCATGA
---ATTTGCATAT
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCYSTKTGCATGA-
--AATTTGCATANT
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TCYSTKTGCATGA--
-------NCGTGACN
 A C G T A G T C A G C T A T G C A G C T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T