Information for 5-TGCCACAGDGGCAGGC (Motif 7)

A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A T C G A G T C A G T C G A C T A G T C A G C T C T A G C G A T C T A G A C T G A G T C C G T A
p-value:1e-13
log p-value:-3.185e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 20.5bp
Average Position of motif in Background52.4 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCACAGDGGCAGGC--
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC
----TGAGTGACAGSC
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC
TGCCCTNAGGGCA---
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCCACAGDGGCAGGC
TGACTCA---------
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCCACAGDGGCAGGC
TTGGCANNNTGCCAAG-
 A C G T A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC
TGCCCTNAGGGCA---
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC
TGCCCNNAGGGCA---
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC-
---CACAGCGGGGGGTC
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGCCACAGDGGCAGGC-
-----AGGTGHCAGACA
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGCCACAGDGGCAGGC
---CACAGN-------
 A C G T A C T G G T A C A G T C C G T A A G T C C T G A A C T G C T G A A C T G T C A G A T G C C G T A A C T G A C T G A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T