Information for 5-AGYAKCTCAACAC (Motif 3)

C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C
Reverse Opposite:
A T C G A G C T A C T G A C G T A C G T C T A G C G T A A C T G G T A C A G C T C T A G A T G C C G A T
p-value:1e-15
log p-value:-3.599e+01
Information Content per bp:1.829
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.0 +/- 22.8bp
Average Position of motif in Background59.7 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGYAKCTCAACAC----
AACACCAAAACAAAGGA
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGYAKCTCAACAC-
--SCTGTCARCACC
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGYAKCTCAACAC
AGCCACTCAAG--
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGYAKCTCAACAC--
-----ATTAACACCT
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGYAKCTCAACAC-----
GAAGTANCACGAATNMRAGT
 A C G T A C G T C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGYAKCTCAACAC
---AAATAAACA-
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGYAKCTCAACAC-
--WWTRTAAACAVG
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXO4/MA0848.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGYAKCTCAACAC
-----GTAAACA-
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C
A C G T A C G T A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T

FOXO6/MA0849.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGYAKCTCAACAC
-----GTAAACA-
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C
A C G T A C G T A C G T A C G T A C G T C T A G C G A T T G C A G T C A C G T A A G T C C T G A A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGYAKCTCAACAC--
---ATGTAAACADGS
 C G T A A T C G G A T C C T G A C A T G A G T C A C G T A G T C C G T A C G T A A G T C T C G A A T G C A C G T A C G T
A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C