Information for 3-ACTNRCCAAGGGGTCA (Motif 3)

T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
Reverse Opposite:
A C G T C A T G C G T A A T G C A G T C G T A C A G T C C G A T C A G T T A C G A C T G A G C T A G T C C G T A A T C G A C G T
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.696
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets29.2 +/- 23.9bp
Average Position of motif in Background49.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA-----
----GGCGAGGGGTCAAGGGC
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:ACTNRCCAAGGGGTCA-----
----NTNNNGGGGTCANGNNN
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA-----
----CTCCAGGGGTCAATTGA
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.67
Offset:8
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA
--------AGRGGTCA
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:10
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA
----------AGGTCA
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA----
-------CAAAGGTCAAGGG
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA
------GGAGGGGGAA
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.57
Offset:8
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA
--------TRAGGTCA
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ACTNRCCAAGGGGTCA----
----TCTCAAAGGTCACGAG
 T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RARA::RXRA/MA0159.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACTNRCCAAGGGGTCA
AGGTCACGGAGAGGTCA
 A C G T T C G A A T G C A C G T A C T G C T G A G T A C A T G C G C T A C G T A A C T G A C T G A C T G A T C G C G A T G A T C C G T A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A