Information for 2-GTCCAGACACGTBVCA (Motif 2)

A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
Reverse Opposite:
A G C T C A T G A C T G T A C G C G T A A G T C A T C G C G A T A C T G C G A T A T G C C G A T A C T G C T A G C T G A A G T C
p-value:1e-13
log p-value:-2.996e+01
Information Content per bp:1.724
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 9.1bp
Average Position of motif in Background63.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCCAGACACGTBVCA
--CCAGACAG------
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCCAGACACGTBVCA
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTCCAGACACGTBVCA
--CCAGACRSVB----
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCCAGACACGTBVCA
CGTCTAGACA-------
 A C G T A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTCCAGACACGTBVCA
------ACACGTGGC-
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GTCCAGACACGTBVCA
-----GGCACGTGNC-
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCCAGACACGTBVCA-
---NNGTCGCGTGNCAC
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A A C G T
A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTCCAGACACGTBVCA
-----GACACGTGCC-
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCCAGACACGTBVCA
----CGGCACGTGCCA
 A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
A C G T A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTCCAGACACGTBVCA
AACATGCCCAGACATGCCCN-
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G T C A G T C C G T A A T C G C G T A A G T C C G T A A T G C C T A G A C G T A G T C T G A C G T A C C T G A
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T A C G T