Information for 11-CCAGTCCTGGTGC (Motif 5)

A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A G T C A G T C C G T A A C T G A C T G G T C A A G T C A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.946
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 27.6bp
Average Position of motif in Background59.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC
CNAGGCCT-----
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGTCCTGGTGC----
-GAGCCCTTGTCCCTAA
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC
CTAGGCCT-----
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC
RCATTCCWGG---
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCAGTCCTGGTGC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC-
----NNCAGGTGCG
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC----
--TNTCCTGCTGTGNNG
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCAGTCCTGGTGC---
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC-
----GACAGGTGTN
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCAGTCCTGGTGC-
----NNCAGGTGNN
 A G T C A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C T G C T A G A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G