Information for 17-GGAATAGTGT (Motif 19)

A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
Reverse Opposite:
C G T A A G T C C T G A A T G C A C G T C G T A A C G T A C G T A G T C A G T C
p-value:1e-2
log p-value:-5.506e+00
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.7 +/- 20.5bp
Average Position of motif in Background53.8 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0035.1_Gsc/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGAATAGTGT--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAATAGTGT
TGGAAAA----
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAATAGTGT
TGGAACAGMA-
 A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGAATAGTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GGAATAGTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAATAGTGT
GGATTAGC--
 A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAATAGTGT
NNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAATAGTGT
GNGGATTAGN--
 A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAATAGTGT
NCTGGAATGC---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAATAGTGT
AGAGGAA------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A T C G A G C T A C T G A C G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T