Information for 10-RCARTTTCAG (Motif 13)

T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G G C T A C T G A G C T A G A T C A G C T A C T G A G T C
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.687
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif580.3
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets44.8 +/- 23.5bp
Average Position of motif in Background50.6 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:RCARTTTCAG-
-TGGTTTCAGT
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-RCARTTTCAG----
TNGAATTTCATTNAN
 A C G T T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RCARTTTCAG----
AACAATTTCAGTGTT
 A C G T T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

SOX4/MA0867.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RCARTTTCAG----
GAACAATTGCAGTGTT
 A C G T A C G T T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RCARTTTCAG----
--AGTTTCAGTTTC
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RCARTTTCAG
--AATTAGTG
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G
A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RCARTTTCAG----
--AGTTTCAKTTTC
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RCARTTTCAG-
-CGGTTTCAAA
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RCARTTTCAG--
TTCATTTGCATAT
 A C G T T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RCARTTTCAG----
--ASTTTCACTTCC
 T C A G T G A C T C G A C T A G C G A T G A C T C G A T T G A C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C