Information for 12-TCTGTGGCCTCCTGCC (Motif 12)

A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C
Reverse Opposite:
T A C G T A C G T A G C T G C A C T A G T A C G T C G A C T A G T A C G T A G C T G A C T G C A T A G C C T G A T A C G T C G A
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.428
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.7 +/- 30.7bp
Average Position of motif in Background72.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCTGTGGCCTCCTGCC-
---CTGGCAGNCTGCCA
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTGTGGCCTCCTGCC-
---TTGGCATGGTGCCA
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTGTGGCCTCCTGCC-
-----SNGCACCTGCHS
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCTGTGGCCTCCTGCC--
--CTTGGCANNNTGCCAA
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTGTGGCCTCCTGCC
GTCTGTGGTTT------
 A C G T A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCTGTGGCCTCCTGCC----
-----GGCCYCCTGCTGDGH
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TCTGTGGCCTCCTGCC-
------NCTTCCCGCCC
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTGTGGCCTCCTGCC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCTGTGGCCTCCTGCC-
------NNTTCCCGCCC
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TCTGTGGCCTCCTGCC----
-----GACCCCCCGCTGTGC
 A G C T A T G C G A C T A T C G A C G T A C T G A T C G A T G C G A T C A G C T A T G C G A T C A C G T A T C G A T G C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C