Information for 12-CCTGACACCGGGC (Motif 10)

A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
Reverse Opposite:
T A C G T A G C G T A C G A T C T A C G A T C G G C A T T C A G A G C T A T G C G C T A C T A G T A C G
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.656
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 24.4bp
Average Position of motif in Background48.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCTGACACCGGGC
VGCTGWCAVB----
 A C G T A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTGACACCGGGC-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTGACACCGGGC-
--TGACACCTGTCA
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C A C G T
A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGACACCGGGC-
--TGACACCTGTCA
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C A C G T
A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGACACCGGGC
-TTGACAG-----
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTGACACCGGGC
ARNTGACA------
 A C G T A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGACACCGGGC
CCAGACAG-----
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTGACACCGGGC--
-NTGCCCTTGGGCGN
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C A C G T A C G T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGACACCGGGC
-YTGWCADY----
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGACACCGGGC-
--TGACAGCTGTCA
 A T G C A G T C C G A T A T C G T C G A A G T C C G T A A T G C A T G C C T A G C A T G A T C G A T G C A C G T
A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A