Information for 1-VCAGCTGBNNNNN (Motif 1)

T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
Reverse Opposite:
G T A C A T C G T C A G A G T C T C G A T C A G A G T C C G T A A T C G T A G C A C G T A C T G A T C G
p-value:1e-205
log p-value:-4.732e+02
Information Content per bp:1.554
Number of Target Sequences with motif607.0
Percentage of Target Sequences with motif73.58%
Number of Background Sequences with motif10254.3
Percentage of Background Sequences with motif23.12%
Average Position of motif in Targets49.8 +/- 26.6bp
Average Position of motif in Background49.7 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VCAGCTGBNNNNN
VCAGCTGBNN---
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VCAGCTGBNNNNN
ACAGCTGTTN---
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---VCAGCTGBNNNNN
NNVVCAGCTGBN----
 A C G T A C G T A C G T T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:VCAGCTGBNNNNN
GCAGCTGTNN---
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-VCAGCTGBNNNNN
GCCAGCTGBTNB--
 A C G T T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.91
Offset:0
Orientation:forward strand
Alignment:VCAGCTGBNNNNN
NCAGCTGCTG---
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-VCAGCTGBNNNNN
NNCAGGTGTN----
 A C G T T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:VCAGCTGBNNNNN
HCAGCTGDTN---
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VCAGCTGBNNNNN
-CAGCTGNT----
 T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--VCAGCTGBNNNNN
NNGCAGCTGTC----
 A C G T A C G T T A G C A G T C C G T A A T C G T A G C A C G T A C T G A G T C A G C T T C A G A G T C T A G C C A T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T