Information for 1-TGAAAATAAC (Motif 4)

C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
Reverse Opposite:
A C T G C G A T A C G T C T G A A C G T A C G T A C G T A C G T G A T C G C T A
p-value:1e-12
log p-value:-2.858e+01
Information Content per bp:1.830
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif149.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets47.8 +/- 27.2bp
Average Position of motif in Background49.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGAAAATAAC
DCYAAAAATAGM
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGAAAATAAC
GCTAAAAATAGC
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGAAAATAAC-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TGAAAATAAC------
-AAAAATAACAAACGG
 C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGAAAATAAC
CCAAAAATAG-
 A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAAAATAAC
KCCAAAAATAGC
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAAATAAC
TCTAAAAATAGA
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAAATAAC
GCTATAAATAGC
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGAAAATAAC
ATATGCAAATNNN
 A C G T A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAAAATAAC
TATGTAAATAT-
 A C G T A C G T C G A T C T A G G T C A C G T A C G T A T G C A A G C T T G C A G C T A A G T C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T