Information for 10-GGGATTCCGC (Motif 17)

A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G C G T A C G T A A C G T A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.471e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 27.4bp
Average Position of motif in Background73.9 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCGC-
GGGGATTCCCCC
 A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGGATTCCGC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGATTCCGC-
-RCATTCCWGG
 A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGGATTCCGC-
----TTCCTCT
 A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGC
GGGGATTTCC--
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCGC
NGGGGATTTCCC
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCGC
NGGGATTA---
 A C G T A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGATTCCGC
GGAAATCCCC
 A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGATTCCGC-
-NRYTTCCGGH
 A C T G A C T G A C T G C G T A A C G T A C G T A G T C A G T C A C T G A G T C A C G T
A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T