Information for 6-CGCGCTGTGAGGTGCG (Motif 15)

A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
Reverse Opposite:
G T A C A C T G A G T C C G T A A G T C A G T C A G C T A G T C C G T A A G T C C G T A A C T G A G T C A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.907e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 14.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGTGAGGTGCG
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGTGAGGTGCG
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGCGCTGTGAGGTGCG
------GTGGGGTGAT
 A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCGCTGTGAGGTGCG
CCTGCTGAGH------
 A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCGCTGTGAGGTGCG
---GCTGTG-------
 A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGTGAGGTGCG
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCTGTGAGGTGCG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGCGCTGTGAGGTGCG
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGTGAGGTGCG
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGCGCTGTGAGGTGCG
------ATGGGGTGAT
 A G T C A C T G T A G C A C T G A G T C A C G T A C T G C G A T A C T G C T G A A C T G A C T G A C G T A C T G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T