Information for 6-RSTACACAAMRAA (Motif 7)

C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A T G C A G C T
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 19.0bp
Average Position of motif in Background27.6 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-RSTACACAAMRAA--
AAACAGACAAAGGAAT
 A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RSTACACAAMRAA-
AAAGTAAACAAAAATT
 A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----RSTACACAAMRAA
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----RSTACACAAMRAA
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RSTACACAAMRAA
CGAAGCACACAAAATA
 A C G T A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RSTACACAAMRAA
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RSTACACAAMRAA
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RSTACACAAMRAA--
CTCACACAATGGCGC
 C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RSTACACAAMRAA
-GTAAACAA----
 C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RSTACACAAMRAA
AAGTAAACAAA---
 A C G T C T G A A T C G A C G T C G T A A G T C C G T A G T A C C G T A T C G A G T C A C T A G C G T A C G T A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T