Information for 5-TGGCACAGACACT (Motif 6)

A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
Reverse Opposite:
C G T A C T A G C G A T C T A G A C G T A T G C A C G T A C T G A C G T A C T G G A T C A G T C C G T A
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 30.4bp
Average Position of motif in Background67.8 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGCACAGACACT-
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGACACT
ARNTGACA--------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGCACAGACACT-
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCACAGACACT
RGGGCACTAACY--
 A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCACAGACACT
CCAGGAACAG-----
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGACACT
NNTTGGCANN------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCACAGACACT
TGACTCA------
 A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGCACAGACACT
---CACAGN----
 A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGACACT
GGTTGGCAT-------
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCACAGACACT
CTTGGCAA-------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A G T C C G T A A T C G C G T A G A T C C G T A A G T C A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T