Information for 2-NNSCACGTGCNBB (Motif 2)

T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
Reverse Opposite:
T A C G T A C G C T G A T A C G A G T C C G T A A T G C T A C G A G C T A C T G A T C G G A T C A G C T
p-value:1e-36
log p-value:-8.350e+01
Information Content per bp:1.578
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif26.75%
Number of Background Sequences with motif5123.6
Percentage of Background Sequences with motif10.99%
Average Position of motif in Targets52.3 +/- 22.7bp
Average Position of motif in Background49.0 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NNSCACGTGCNBB
NNCCACGTGG---
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-NNSCACGTGCNBB
NNACCACGTGGT--
 A C G T T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-ACCACGTGCC--
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-ACCACGTGCT--
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-GNCACGTG----
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-ACCACGTG----
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-NVCACGTG----
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NNSCACGTGCNBB
--CCACGTGGNN-
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NNSCACGTGCNBB
-GCCACGTG----
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NNSCACGTGCNBB
-NACACGTGCN--
 T C G A C T A G T A C G A G T C C T G A A T G C T A C G A C G T A C T G A T G C G A C T A T G C A T G C
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T