Information for 4-CAGCCGGCTGCCC (Motif 7)

A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G T C C T A G A T C G A T G C A C G T A C T G
p-value:1e-13
log p-value:-2.995e+01
Information Content per bp:1.939
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 22.5bp
Average Position of motif in Background58.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCGGCTGCCC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CAGCCGGCTGCCC---
-------CTGCCCGCA
 A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGCCGGCTGCCC
NAACAGCTGG------
 A C G T A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGCTGCCC
HCAGCTGDTN----
 A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCGGCTGCCC
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCGGCTGCCC
TACATCCGGGT----
 A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAGCCGGCTGCCC
VNAVCAGCTGGC-----
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCGGCTGCCC
AACAGATGGC-----
 A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGCCGGCTGCCC
CACAGCAGGGGG---
 A C G T A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGCTGCCC
GCAGCTGTNN----
 A C G T A G T C C G T A A T C G A T G C A G T C A C T G C T A G A G T C A C G T A T C G A G T C A G T C A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T