Information for 4-TGSCKCMCKT (Motif 5)

A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T
Reverse Opposite:
C G T A G T C A C T A G A C T G A T C G G T A C C A T G A T C G A G T C G T C A
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.735
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif494.6
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets51.5 +/- 26.6bp
Average Position of motif in Background48.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGSCKCMCKT---
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGSCKCMCKT-
---BGCACGTA
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGSCKCMCKT--
----GCACGTAY
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGSCKCMCKT----
----GCACGTACCC
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGSCKCMCKT
-GGCGCGCT-
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGSCKCMCKT--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGSCKCMCKT--
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGSCKCMCKT
TTTGGCGCCAAA
 A C G T A C G T A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGSCKCMCKT--
----GCACGTNC
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGSCKCMCKT----
----AACCTTATAT
 A C G T A C T G A T G C G T A C A C T G A T G C G T A C A G T C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T