Information for 2-AGACATTCCC (Motif 9)

T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C
Reverse Opposite:
A C T G A C T G C T A G T G C A G T C A A C G T C T A G G A C T A G T C A G C T
p-value:1e-12
log p-value:-2.914e+01
Information Content per bp:1.728
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif773.2
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets54.3 +/- 26.4bp
Average Position of motif in Background49.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGACATTCCC
GGAAATTCCC
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

TEAD3/MA0808.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGACATTCCC
--ACATTCCA
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGACATTCCC--
--RCATTCCWGG
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGACATTCCC
GGAAATTCCC
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGACATTCCC--
GGGAAATCCCCN
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGACATTCCC
GGAAATCCCC
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGACATTCCC-
-CACATTCCAT
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGACATTCCC---
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGACATTCCC--
--RCATTCCWGG
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T A C G T
A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGACATTCCC-
-CACATTCCAT
 T C G A C T A G C T G A G A T C C G T A C A G T A C G T A G T C G T A C G T A C A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T