Information for 6-CCATCCCCGTGTGCYC (Motif 7)

A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
Reverse Opposite:
A C T G C T G A A T C G G T A C C T G A A G T C C G T A T A G C T A C G C T A G T A C G A C T G C G T A A C G T A C T G A C T G
p-value:1e-13
log p-value:-2.994e+01
Information Content per bp:1.767
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.1 +/- 14.5bp
Average Position of motif in Background70.7 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCATCCCCGTGTGCYC
GACCCCCCGCTGCGC--
 A C G T A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCATCCCCGTGTGCYC
GACCCCCCGCTGTG---
 A C G T A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCATCCCCGTGTGCYC
GACCCCCCGCTGTGC--
 A C G T A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCATCCCCGTGTGCYC
GGCCYCCTGCTGDGH--
 A C G T A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCATCCCCGTGTGCYC
-NNTCCTGCTGTGNNN
 A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCATCCCCGTGTGCYC---
---GGGCCGTGTGCAAAAA
 A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCATCCCCGTGTGCYC-
---CCCCCTTGGGCCCC
 A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C A C G T
A C G T A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCATCCCCGTGTGCYC
-CCCCCTGCTGTG---
 A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCATCCCCGTGTGCYC
KGCCCTTCCCCA-------
 A C G T A C G T A C G T A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCATCCCCGTGTGCYC------
-----TACATGTGCACATAAAA
 A G T C A G T C G T C A G C A T A G T C A G T C A G T C A T G C A T C G A C G T A C T G A G C T A C T G A T G C G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A