Information for 18-GCAATCACTCTGG (Motif 34)

T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
Reverse Opposite:
A G T C G T A C G C T A C T A G T G C A T C A G A C G T T A C G T G C A G A C T A C G T A T C G A G T C
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.656
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif428.9
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets45.9 +/- 17.3bp
Average Position of motif in Background50.8 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAATCACTCTGG
GCGACCACACTG-
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCAATCACTCTGG
--MRSCACTYAA-
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAATCACTCTGG
--AGCCACTCAAG
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAATCACTCTGG
CCAATCAA-----
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCAATCACTCTGG---
------GGTCTGGCAT
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCAATCACTCTGG
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCAATCACTCTGG--
-----CCTGCTGAGH
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAATCACTCTGG
CAAATCACTG---
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCAATCACTCTGG
--AAGCACTTAA-
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAATCACTCTGG--
---ATGACTCAGCAD
 T C A G T A G C G T C A C G T A A C G T A G T C T C G A A G T C A C G T A G T C C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T