p-value: | 1e-9 |
log p-value: | -2.141e+01 |
Information Content per bp: | 1.676 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 2.76% |
Number of Background Sequences with motif | 237.2 |
Percentage of Background Sequences with motif | 0.49% |
Average Position of motif in Targets | 50.1 +/- 25.9bp |
Average Position of motif in Background | 50.6 +/- 31.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACGAGTGTCT TTRAGTGSYK |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACGAGTGTCT-- --VBSYGTCTGG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACGAGTGTCT-- ----CTGTCTGG |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACGAGTGTCT TTGAGTGSTT |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACGAGTGTCT-- ----TWGTCTGV |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACGAGTGTCT NTCAAGTGG-- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACGAGTGTCT CTYRAGTGSY- |
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HEY2/MA0649.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACGAGTGTCT GGCACGTGNC- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACGAGTGTCT------- NNTNNTGTCTGGNNTNG |
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CLOCK/MA0819.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACGAGTGTCT AACACGTGTT- |
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