Information for 2-CTGAGGCGGCGGG (Motif 3)

A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C A C T G A G T C A G T C A C T G A G T C A G T C A G C T T A G C G T C A A C T G
p-value:1e-16
log p-value:-3.760e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 26.5bp
Average Position of motif in Background74.0 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGAGGCGGCGGG--
GGGNGGGGGCGGGGC
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGAGGCGGCGGG--
-GGCGGGGGCGGGGG
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGCGGCGGG---
NNNAAGGGGGCGGGNNN
 A C G T A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGGCGGCGGG
ANTGCGGGGGCGGN
 A C G T A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTGAGGCGGCGGG--
----GGGGGCGGGGC
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGAGGCGGCGGG---
----GGGGGCGGGGCC
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGAGGCGGCGGG-----
-NAGANTGGCGGGGNGNA
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGAGGCGGCGGG----
---AGGGGGCGGGGCTG
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGCGGCGGG
TGCCTGAGGCN-----
 A C G T A C G T A C G T A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGAGGCGGCGGG--
---RGKGGGCGKGGC
 A G T C A C G T A C T G C T G A A C T G A C T G A G T C C T A G A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C