Information for 10-CTGGGACTTTVCA (Motif 23)

A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G T G C A C T G A G T C A C T A G A C G T A G T C G T A C A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.796
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 20.5bp
Average Position of motif in Background50.3 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGGGACTTTVCA
--GGGAATTTCC-
 A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGGACTTTVCA
--GGGAATTTCC-
 A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGACTTTVCA
TGCTGTGATTT----
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGGGACTTTVCA
--GGGGATTTCC-
 A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGGGACTTTVCA
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGGGACTTTVCA
GCTGTG--------
 A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGACTTTVCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGGGACTTTVCA
--GGGGATTTCC-
 A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGGACTTTVCA
-NGGGGATTTCCC
 A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGACTTTVCA
RGSMTBCTGGGAAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A G T C C A G T A G C T A C G T T A G C A G T C C G T A
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T