Information for 3-GTATAGTTCG (Motif 22)

A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G
Reverse Opposite:
A T G C C T A G C G T A C G T A A G T C A G C T G T C A A C G T G T C A A G T C
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.9 +/- 19.6bp
Average Position of motif in Background58.8 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTATAGTTCG----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTATAGTTCG
--ATTGTTA-
 A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGTTCG---
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTATAGTTCG
CCATTGTTC-
 A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGTTCG---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGTTCG----
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTATAGTTCG---
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTATAGTTCG---
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTATAGTTCG
NTATYGATCH
 A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTATAGTTCG----
TCGCGAAGGTTGTACT
 A C G T A C G T A C T G A C G T C G T A A C G T C T G A A C T G A C G T A C G T A G T C A T C G A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T