Information for 12-TTCACTGCAGGTGGGT (Motif 20)

A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
Reverse Opposite:
C T G A A G T C A G T C A G T C C G T A A G T C G A T C A C G T A C T G A G T C G T C A A T C G A C G T A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 13.9bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTCACTGCAGGTGGGT
--CACAGCAGGGGG--
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
-DCHCAGCAGGRGGCC
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
----SDGCAGGTGCNS
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCACTGCAGGTGGGT
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
-----NNCAGGTGNN-
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
-------CAGGTGAGG
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
-----NNCAGGTGCG-
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTCACTGCAGGTGGGT
-----NNCAGGTGTN-
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCACTGCAGGTGGGT
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTCACTGCAGGTGGGT
-----AACAGGTGT--
 A C G T A C G T A G T C C G T A A T G C A C G T A C T G A G T C C G T A C A T G A C T G C G A T C T A G A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T