Information for 8-TGTAGGTCCATCT (Motif 18)

A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A A C G T C A T G A T C G G T C A G T A C A G T C G C A T G T C A T G A C G T C A
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.734
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 22.7bp
Average Position of motif in Background71.4 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TGTAGGTCCATCT---
------GCCATCTGTT
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGTAGGTCCATCT---
------ACCATCTGTT
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTAGGTCCATCT------
--CCNNACCATCTGGCCTN
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTAGGTCCATCT
TATAAGTAGGTCAA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGTAGGTCCATCT---
------RCCATMTGTT
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TGTAGGTCCATCT--------
--TAGCGCCCCCTGGTGGCCA
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGTAGGTCCATCT--
---GCNGCCATCTTG
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGTAGGTCCATCT--------
-ANAGTGCCACCTGGTGGCCA
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGTAGGTCCATCT
AAYTAGGTCA----
 A C G T A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGTAGGTCCATCT
---AGGTCA----
 A C G T A C T G A C G T C G T A C T A G A C T G A C G T A T G C G A T C G T C A A G C T A G T C A C G T
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T